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  5. Solyc07g043650

Solyc07g043650


Description : CoA ligase (AHRD V3.3 *** A0A0K9NMT8_ZOSMR)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g043650
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
409095 No alias acyl activating enzyme 1 0.03 Orthogroups_2024-Update
A4A49_16169 No alias acetatebutyrate--coa ligase aae7, peroxisomal 0.02 Orthogroups_2024-Update
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.04 Orthogroups_2024-Update
Seita.9G431700.1 No alias peroxisomal acetyl-CoA synthetase *(ACN/BZU) 0.03 Orthogroups_2024-Update
Seita.9G554000.1 No alias benzoyl-CoA ligase *(BZO1) 0.03 Orthogroups_2024-Update
Solyc03g031940 No alias AMP-dependent synthetase and ligase family protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g027700 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 68 175
IPR000873 AMP-dep_Synth/Lig 252 430
No external refs found!