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  5. LOC_Os03g03000

LOC_Os03g03000


Description : helix-loop-helix DNA-binding domain containing protein, expressed


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g03000
Cluster HCCA clusters: cluster_0116

Target Alias Description ECC score Gene Family Method Actions
430716 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_05710 No alias transcription factor bhlh96 0.03 Orthogroups_2024-Update
Bradi3g52150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A02600.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B01465.1 No alias regulatory protein *(SPCH) of asymmetric cell division &... 0.05 Orthogroups_2024-Update
GRMZM2G082586 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G417164 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G231800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G070000.9 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os02g52190 No alias helix-loop-helix DNA-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.008G202900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G128100.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g098720 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006658 phosphatidylserine metabolic process IEP Predicted GO
BP GO:0006659 phosphatidylserine biosynthetic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 115 166
No external refs found!