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  5. LOC_Os03g03900

LOC_Os03g03900


Description : NIN, putative, expressed


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g03900
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
Bradi1g76340 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Bradi2g08177 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Brara.B01980.1 No alias NLP-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G109509 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Glyma.15G027900 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Sobic.006G133900.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update
Solyc04g082480 No alias Plant regulator RWP-RK family protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Solyc08g013900 No alias Plant regulator RWP-RK family protein (AHRD V3.3 *** AT2G43500.9) 0.03 Orthogroups_2024-Update
Sopen11g020820 No alias RWP-RK domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006481 C-terminal protein methylation IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0018410 C-terminal protein amino acid modification IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043687 post-translational protein modification IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 622 670
IPR000270 PB1_dom 845 926
No external refs found!