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  5. LOC_Os03g04990

LOC_Os03g04990


Description : expressed protein


Gene families : OG_42_0002275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g04990
Cluster HCCA clusters: cluster_0106

Target Alias Description ECC score Gene Family Method Actions
430564 No alias Function unknown 0.03 Orthogroups_2024-Update
AC212015.4_FG003 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi1g75500 No alias Protein of unknown function (DUF3741) 0.05 Orthogroups_2024-Update
Sobic.004G344400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc09g063090 No alias methyl-coenzyme M reductase II subunit gamma, putative... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022212 DUF3741 174 218
IPR025486 DUF4378 721 892
No external refs found!