LOC_Os03g06630

Description : heat stress transcription factor, putative, expressed

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os03g06630
Cluster	HCCA clusters: cluster_0006

Target	Alias	Description	ECC score	Gene Family Method
107503	No alias	heat shock transcription factor A1D	0.02	Orthogroups_2024-Update
A4A49_40866	No alias	heat stress transcription factor b-2b	0.03	Orthogroups_2024-Update
At1g32330	No alias	Heat stress transcription factor A-1d...	0.03	Orthogroups_2024-Update
At3g02990	No alias	Heat stress transcription factor A-1e...	0.02	Orthogroups_2024-Update
Bradi1g38140	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
Bradi5g18680	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
Brara.A00901.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.04	Orthogroups_2024-Update
Brara.A00997.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C02475.1	No alias	transcriptional memory factor *(HsfA2) & HSF-type...	0.03	Orthogroups_2024-Update
Brara.C02682.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C03963.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D00624.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Brara.F02032.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I01903.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G132971	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
GRMZM2G165272	No alias	heat shock transcription factor B2A	0.05	Orthogroups_2024-Update
GRMZM2G165972	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
GRMZM2G301485	No alias	heat shock transcription factor B2A	0.05	Orthogroups_2024-Update
Glyma.01G217400	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.03G157300	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.10G029600	No alias	heat shock transcription factor A6B	0.03	Orthogroups_2024-Update
Glyma.10G237800	No alias	heat shock transcription factor B2A	0.04	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
HORVU4Hr1G073650.2	No alias	HSF-type transcription factor	0.05	Orthogroups_2024-Update
HORVU5Hr1G105770.2	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G056820.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
PSME_00001672-RA	No alias	(at4g36990 : 204.0) encodes a protein whose sequence is...	0.02	Orthogroups_2024-Update
PSME_00022202-RA	No alias	(at5g16820 : 205.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
Potri.008G136800	No alias	heat shock transcription factor A8	0.02	Orthogroups_2024-Update
Potri.011G071700	No alias	heat shock transcription factor A4A	0.05	Orthogroups_2024-Update
Potri.015G141100	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
Seita.1G025800.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.2G229700.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G531900.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G496200.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G224200.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G225300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G101400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc07g040680	No alias	SolycHsfA9	0.02	Orthogroups_2024-Update
Sopen02g020980	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update
Sopen03g004850	No alias	HSF-type DNA-binding	0.02	Orthogroups_2024-Update
Sopen07g019390	No alias	HSF-type DNA-binding	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predicted GO
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0006534	cysteine metabolic process	IEP	Predicted GO
BP	GO:0006535	cysteine biosynthetic process from serine	IEP	Predicted GO
BP	GO:0006563	L-serine metabolic process	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Predicted GO
MF	GO:0009001	serine O-acetyltransferase activity	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
MF	GO:0016407	acetyltransferase activity	IEP	Predicted GO
MF	GO:0016412	serine O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016413	O-acetyltransferase activity	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0019344	cysteine biosynthetic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	38	147

External Links

No external refs found!

LOC_Os03g06630

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation