Description : ribosomal protein S2, putative, expressed
Gene families : OG_42_0001668 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001668_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os03g08440 | |
Cluster | HCCA clusters: cluster_0085 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
36118 | No alias | 40s ribosomal protein SA | 0.03 | Orthogroups_2024-Update | |
At1g72370 | No alias | 40S ribosomal protein SA [Source:UniProtKB/TrEMBL;Acc:A0A178WNA1] | 0.02 | Orthogroups_2024-Update | |
Bradi1g20880 | No alias | 40s ribosomal protein SA B | 0.04 | Orthogroups_2024-Update | |
Bradi1g23780 | No alias | 40s ribosomal protein SA B | 0.05 | Orthogroups_2024-Update | |
Bradi1g60310 | No alias | 40s ribosomal protein SA B | 0.05 | Orthogroups_2024-Update | |
Bradi1g72480 | No alias | 40s ribosomal protein SA B | 0.02 | Orthogroups_2024-Update | |
Brara.B02024.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.G02358.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.G03124.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Glyma.07G043800 | No alias | 40s ribosomal protein SA B | 0.03 | Orthogroups_2024-Update | |
Glyma.08G159800 | No alias | 40s ribosomal protein SA B | 0.04 | Orthogroups_2024-Update | |
Glyma.15G267100 | No alias | 40s ribosomal protein SA B | 0.04 | Orthogroups_2024-Update | |
Glyma.16G012200 | No alias | 40s ribosomal protein SA B | 0.04 | Orthogroups_2024-Update | |
HORVU2Hr1G030880.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Mp2g26290.1 | No alias | component RPSa of SSU proteome | 0.03 | Orthogroups_2024-Update | |
Potri.003G071200 | No alias | 40s ribosomal protein SA B | 0.05 | Orthogroups_2024-Update | |
Potri.012G117600 | No alias | 40s ribosomal protein SA B | 0.05 | Orthogroups_2024-Update | |
Pp1s173_16V6 | No alias | 40s ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s48_103V6 | No alias | 40s ribosomal protein sa | 0.02 | Orthogroups_2024-Update | |
Seita.2G389700.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.002G374900.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.002G375100.1 | No alias | component *(uS2) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Solyc03g019780 | No alias | 40S ribosomal protein SA (AHRD V3.3 *** K4BEV0_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc06g072120 | No alias | 40S ribosomal protein SA (AHRD V3.3 *** K4C8T4_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Sopen03g029850 | No alias | Ribosomal protein S2 | 0.03 | Orthogroups_2024-Update | |
Sopen06g028410 | No alias | Ribosomal protein S2 | 0.04 | Orthogroups_2024-Update | |
evm.model.contig_4456.25 | No alias | (o22518|rssa_soybn : 282.0) 40S ribosomal protein SA... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004055 | argininosuccinate synthase activity | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
MF | GO:0004635 | phosphoribosyl-AMP cyclohydrolase activity | IEP | Predicted GO |
CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006525 | arginine metabolic process | IEP | Predicted GO |
BP | GO:0006526 | arginine biosynthetic process | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009451 | RNA modification | IEP | Predicted GO |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0016053 | organic acid biosynthetic process | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
BP | GO:0034613 | cellular protein localization | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044283 | small molecule biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
BP | GO:0045048 | protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Predicted GO |
BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0070727 | cellular macromolecule localization | IEP | Predicted GO |
BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Predicted GO |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Predicted GO |
No external refs found! |