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  5. LOC_Os03g08500

LOC_Os03g08500


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g08500
Cluster HCCA clusters: cluster_0106

Target Alias Description ECC score Gene Family Method Actions
73155 No alias DREB and EAR motif protein 3 0.03 Orthogroups_2024-Update
A4A49_02884 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
A4A49_08959 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_16120 No alias ethylene-responsive transcription factor erf061 0.02 Orthogroups_2024-Update
A4A49_21566 No alias ethylene-responsive transcription factor erf087 0.02 Orthogroups_2024-Update
AC209257.4_FG006 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
At1g01250 No alias Ethylene-responsive transcription factor ERF023... 0.02 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.03 Orthogroups_2024-Update
At2g22200 No alias Ethylene-responsive transcription factor ERF056... 0.04 Orthogroups_2024-Update
At4g32800 No alias Ethylene-responsive transcription factor ERF043... 0.03 Orthogroups_2024-Update
Bradi2g29960 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g08790 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g29010 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g10107 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00881.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.B01523.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.B03207.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.C03513.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Brara.F00298.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.F01354.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.03 Orthogroups_2024-Update
Brara.G00520.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.J02053.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G263700 No alias related to AP2 12 0.03 Orthogroups_2024-Update
Glyma.05G049900 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G125100 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Glyma.08G216600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G304300 No alias Integrase-type DNA-binding superfamily protein 0.01 Orthogroups_2024-Update
Glyma.15G079100 No alias ethylene responsive element binding factor 2 0.01 Orthogroups_2024-Update
Glyma.18G206600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G026000 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.20G115300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G203700 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
HORVU0Hr1G007050.2 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G078150.2 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g22170 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g39850 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
PSME_00003641-RA No alias (at3g14230 : 136.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00042940-RA No alias (at1g53910 : 121.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00046052-RA No alias (at1g19210 : 89.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00056631-RA No alias (at5g21960 : 125.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G110700 No alias C-repeat-binding factor 4 0.03 Orthogroups_2024-Update
Potri.003G121200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G072600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.011G056900 No alias ERF domain protein 12 0.02 Orthogroups_2024-Update
Potri.011G057000 No alias erf domain protein 9 0.02 Orthogroups_2024-Update
Potri.011G115600 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Potri.019G073300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.02 Orthogroups_2024-Update
Pp1s72_230V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.1G323500.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Seita.2G156200.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.6G023700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G141600.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Seita.7G232100.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.9G323300.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G455400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G531100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G415600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Sobic.004G295500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G156100.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G188701.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G151600.2 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G080400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G240900.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g095500 No alias Sl Cytokinin Response Factor 5 0.02 Orthogroups_2024-Update
Solyc03g005520 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g123500 No alias GCC box binding protein C.4 0.03 Orthogroups_2024-Update
Solyc09g091950 No alias Ethylene-responsive transcription factor ERF062 (AHRD... 0.02 Orthogroups_2024-Update
Solyc12g056980 No alias Ethylene-responsive element binding-factor (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g027740 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030960 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen09g032850 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 96 145
No external refs found!