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  5. LOC_Os03g19470

LOC_Os03g19470


Description : proteins of unknown function domain containing protein, expressed


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g19470
Cluster HCCA clusters: cluster_0014

Target Alias Description ECC score Gene Family Method Actions
A4A49_06264 No alias protein trichome birefringence 0.03 Orthogroups_2024-Update
Bradi4g42860 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.02 Orthogroups_2024-Update
Bradi5g15190 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Brara.B03486.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.03 Orthogroups_2024-Update
GRMZM2G165961 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Glyma.09G109600 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
HORVU6Hr1G078930.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.03 Orthogroups_2024-Update
MA_10143614g0010 No alias (at5g19160 : 331.0) Encodes a member of the TBL... 0.02 Orthogroups_2024-Update
MA_128999g0010 No alias (at5g19160 : 318.0) Encodes a member of the TBL... 0.02 Orthogroups_2024-Update
Potri.002G195800 No alias TRICHOME BIREFRINGENCE-LIKE 6 0.02 Orthogroups_2024-Update
Potri.006G193900 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Seita.5G060900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G399400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g012090 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0036297 interstrand cross-link repair IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
CC GO:0043240 Fanconi anaemia nuclear complex IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 338 617
IPR025846 PMR5_N_dom 286 336
No external refs found!