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  5. LOC_Os03g31300

LOC_Os03g31300


Description : chaperone protein clpB 1, putative, expressed


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g31300
Cluster HCCA clusters: cluster_0130

Target Alias Description ECC score Gene Family Method Actions
170696 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
411118 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Bradi2g49660 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.03 Orthogroups_2024-Update
Cre11.g467644 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Cre12.g533351 No alias heat shock protein 101 0.01 Orthogroups_2024-Update
GRMZM2G360681 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Glyma.06G202200 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
MA_596288g0010 No alias (at5g50920 : 437.0) Encodes a protein that is similar to... 0.02 Orthogroups_2024-Update
MA_8117g0010 No alias (at5g50920 : 620.0) Encodes a protein that is similar to... 0.03 Orthogroups_2024-Update
Mp1g02560.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.02 Orthogroups_2024-Update
Mp1g16450.1 No alias cytosolic chaperone (Hsp101) 0.02 Orthogroups_2024-Update
Mp3g09010.1 No alias organellar chaperone (Clp-p|Clp-m) 0.02 Orthogroups_2024-Update
PSME_00014106-RA No alias (at5g15450 : 850.0) Encodes a chloroplast-targeted... 0.03 Orthogroups_2024-Update
PSME_00031080-RA No alias (at5g51070 : 879.0) ATP-dependent Clp protease... 0.02 Orthogroups_2024-Update
PSME_00036597-RA No alias (at5g50920 : 1365.0) Encodes a protein that is similar... 0.02 Orthogroups_2024-Update
Potri.017G090600 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Pp1s300_55V6 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Pp1s81_51V6 No alias atpase aaa-2 domain protein 0.03 Orthogroups_2024-Update
Seita.9G360800.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.05 Orthogroups_2024-Update
Sopen12g021150 No alias AAA domain (Cdc48 subfamily) 0.03 Orthogroups_2024-Update
evm.model.contig_3516.2 No alias (at1g74310 : 794.0) Encodes ClpB1, which belongs to the... 0.02 Orthogroups_2024-Update
evm.model.contig_487.1 No alias (p35100|clpc_pea : 624.0) ATP-dependent Clp protease... 0.01 Orthogroups_2024-Update
evm.model.tig00000655.28 No alias (at5g50920 : 1134.0) Encodes a protein that is similar... 0.04 Orthogroups_2024-Update
evm.model.tig00001416.8 No alias (at3g48870 : 359.0) Encodes a nuclear encoded protein... 0.01 Orthogroups_2024-Update
evm.model.tig00020563.86 No alias (at5g50920 : 990.0) Encodes a protein that is similar to... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0003879 ATP phosphoribosyltransferase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004176 Clp_N 177 228
IPR004176 Clp_N 102 151
IPR003959 ATPase_AAA_core 286 418
IPR003959 ATPase_AAA_core 683 851
IPR019489 Clp_ATPase_C 858 937
No external refs found!