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  5. LOC_Os03g31480

LOC_Os03g31480


Description : expansin precursor, putative, expressed


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g31480
Cluster HCCA clusters: cluster_0001

Target Alias Description ECC score Gene Family Method Actions
419575 No alias expansin A16 0.02 Orthogroups_2024-Update
90332 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
A4A49_21927 No alias expansin-a7 0.04 Orthogroups_2024-Update
HORVU0Hr1G032890.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G034030.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
MA_915221g0010 No alias (at1g69530 : 376.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.002G184700 No alias expansin A17 0.03 Orthogroups_2024-Update
Sobic.003G444400.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc09g010860 No alias expansin precursor 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 64 151
IPR007117 Expansin_CBD 162 239
No external refs found!