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  5. Solyc01g081040

Solyc01g081040


Description : RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061F730_THECC)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g081040
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
A4A49_09968 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
At1g35330 No alias RING/U-box superfamily protein [Source:TAIR;Acc:AT1G35330] 0.03 Orthogroups_2024-Update
At2g35000 No alias E3 ubiquitin-protein ligase ATL9... 0.03 Orthogroups_2024-Update
At4g09130 No alias Putative RING-H2 finger protein ATL37... 0.05 Orthogroups_2024-Update
Bradi1g43750 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g49152 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Brara.A03822.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.C03092.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.E00442.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H02311.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G386584 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G222300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G140800 No alias carbon/nitrogen insensitive 1 0.03 Orthogroups_2024-Update
Glyma.09G264300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G028400 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Glyma.18G176200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G104860.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU4Hr1G082740.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g11460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g15010 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g34650 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g05370 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_101154g0010 No alias (at3g16720 : 130.0) RING-H2 protein induced after... 0.03 Orthogroups_2024-Update
MA_10436650g0010 No alias (at1g72310 : 126.0) Encodes a putative RING-H2 zinc... 0.03 Orthogroups_2024-Update
MA_786911g0010 No alias (at1g53820 : 92.8) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_94359g0010 No alias (at4g35480 : 121.0) Encodes a putative RING-H2 finger... 0.02 Orthogroups_2024-Update
Potri.005G036800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G244800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G073900 No alias TOXICOS EN LEVADURA 2 0.03 Orthogroups_2024-Update
Potri.016G067900 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G049300 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
Pp1s213_71V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Pp1s6_257V6 No alias ring finger 0.02 Orthogroups_2024-Update
Seita.1G327300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.8G032100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g051250 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.04 Orthogroups_2024-Update
Solyc12g087860 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g033270 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen04g036320 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00020684.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042816 vitamin B6 metabolic process IEP Predicted GO
BP GO:0042819 vitamin B6 biosynthetic process IEP Predicted GO
BP GO:0042822 pyridoxal phosphate metabolic process IEP Predicted GO
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP Predicted GO
BP GO:0046184 aldehyde biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 138 181
No external refs found!