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  5. LOC_Os03g38800

LOC_Os03g38800


Description : AAA family ATPase, putative, expressed


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g38800
Cluster HCCA clusters: cluster_0054

Target Alias Description ECC score Gene Family Method Actions
A4A49_21385 No alias protein hyper-sensitivity-related 4 0.02 Orthogroups_2024-Update
At3g28510 No alias AAA-ATPase At3g28510 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH84] 0.02 Orthogroups_2024-Update
At3g28610 No alias AAA-ATPase At3g28610 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJJ5] 0.03 Orthogroups_2024-Update
Brara.B03332.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01164.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G175593 No alias cytochrome BC1 synthesis 0.02 Orthogroups_2024-Update
GRMZM2G444560 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.19G018600 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
HORVU5Hr1G063340.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G098210.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G361900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G210100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g087540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Solyc05g007470 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Solyc10g007280 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Sopen02g013560 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update
Sopen02g029570 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update
Sopen03g006600 No alias Domain associated at C-terminal with AAA 0.02 Orthogroups_2024-Update
evm.model.contig_2025.33 No alias (at2g18190 : 120.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 56 162
IPR003959 ATPase_AAA_core 385 441
IPR003959 ATPase_AAA_core 283 349
No external refs found!