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Description : retrotransposon protein, putative, LINE subclass
Gene families : OG_42_0000731 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000731_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os03g39680 | |
| Cluster | HCCA clusters: cluster_0058 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi5g15081 | No alias | RNA-directed DNA polymerase (reverse... | 0.01 | Orthogroups_2024-Update | |
| HORVU5Hr1G042170.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G012090.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
| HORVU7Hr1G064620.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Predicted GO |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predicted GO |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0010167 | response to nitrate | IEP | Predicted GO |
| BP | GO:0015706 | nitrate transport | IEP | Predicted GO |
| BP | GO:0016485 | protein processing | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0019900 | kinase binding | IEP | Predicted GO |
| MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
| BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predicted GO |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predicted GO |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
| BP | GO:0051604 | protein maturation | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:1901698 | response to nitrogen compound | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000477 | RT_dom | 39 | 206 |
| No external refs found! |