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  5. LOC_Os03g41080

LOC_Os03g41080


Description : seed maturation protein PM23, putative, expressed


Gene families : OG_42_0003646 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g41080
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
A4A49_11371 No alias hypothetical protein 0.02 Orthogroups_2024-Update
At2g14910 No alias MAR-binding filament-like protein... 0.04 Orthogroups_2024-Update
Brara.I00969.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.10G260200 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.20G130900 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU4Hr1G013310.4 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU5Hr1G018840.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp2g22010.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Seita.9G171300.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.001G169900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc02g087340 No alias Hop-interacting protein THI043 (AHRD V3.3 *** G8Z270_SOLLC) 0.03 Orthogroups_2024-Update
Sopen02g032090 No alias Protein of unknown function (DUF760) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008252 nucleotidase activity IEP Predicted GO
MF GO:0008253 5'-nucleotidase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predicted GO
BP GO:0009264 deoxyribonucleotide catabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008479 DUF760 271 388
IPR008479 DUF760 85 166
No external refs found!