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  5. LOC_Os03g42760

LOC_Os03g42760


Description : zinc finger protein-related, putative, expressed


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g42760
Cluster HCCA clusters: cluster_0115

Target Alias Description ECC score Gene Family Method Actions
Brara.C01608.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Kfl00084_0120 kfl00084_0120_v1.1 (at2g16090 : 575.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.01 Orthogroups_2024-Update
Mp4g17020.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
PSME_00007947-RA No alias (at4g34370 : 140.0) ARIADNE 1 (ARI1); FUNCTIONS IN: zinc... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 203 265
IPR002867 IBR_dom 282 323
No external refs found!