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  5. LOC_Os03g43410

LOC_Os03g43410


Description : OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g43410
Cluster HCCA clusters: cluster_0054

Target Alias Description ECC score Gene Family Method Actions
A4A49_02602 No alias auxin-responsive protein iaa14 0.03 Orthogroups_2024-Update
A4A49_26447 No alias auxin-responsive protein iaa13 0.02 Orthogroups_2024-Update
At5g65670 No alias Auxin-responsive protein IAA9... 0.02 Orthogroups_2024-Update
GRMZM2G138268 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
Glyma.08G203100 No alias phytochrome-associated protein 2 0.02 Orthogroups_2024-Update
Glyma.20G210400 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
HORVU3Hr1G031460.3 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
HORVU5Hr1G093640.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
MA_10430843g0010 No alias (at4g29080 : 97.8) phytochrome-associated protein 2... 0.02 Orthogroups_2024-Update
Seita.5G268600.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sobic.009G085100.2 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc06g053840 No alias auxin-regulated IAA4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 34 219
No external refs found!