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  5. LOC_Os03g47070

LOC_Os03g47070


Description : RXW8, putative, expressed


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g47070
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
A4A49_15965 No alias csc1-like protein erd4 0.02 Orthogroups_2024-Update
Brara.A01995.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Brara.A02367.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
HORVU5Hr1G001670.1 No alias calcium-permeable channel *(OSCA) 0.02 Orthogroups_2024-Update
Kfl00071_0140 kfl00071_0140_v1.1 (at4g04340 : 511.0) ERD (early-responsive to dehydration... 0.03 Orthogroups_2024-Update
Potri.002G226800 No alias ERD (early-responsive to dehydration stress) family protein 0.02 Orthogroups_2024-Update
Pp1s86_71V6 No alias early responsive to dehydration protein 0.02 Orthogroups_2024-Update
Sopen04g030990 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
Sopen08g024920 No alias Domain of unknown function DUF221 0.02 Orthogroups_2024-Update
evm.model.tig00000227.25 No alias (at1g30360 : 154.0) early-responsive to dehydration 4... 0.01 Orthogroups_2024-Update
evm.model.tig00000655.11 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003864 RSN1_7TM 58 324
IPR027815 PHM7_cyt 4 47
No external refs found!