Description : SAB, putative, expressed
Gene families : OG_42_0002631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002631_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os03g47760 | |
Cluster | HCCA clusters: cluster_0130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g12490 | No alias | Golgi-body localisation protein domain ;RNA pol II... | 0.06 | Orthogroups_2024-Update | |
Cre14.g608050 | No alias | Golgi-body localisation protein domain ;RNA pol II... | 0.02 | Orthogroups_2024-Update | |
Glyma.04G096600 | No alias | Golgi-body localisation protein domain ;RNA pol II... | 0.03 | Orthogroups_2024-Update | |
Glyma.06G098300 | No alias | Golgi-body localisation protein domain ;RNA pol II... | 0.05 | Orthogroups_2024-Update | |
Seita.9G139500.1 | No alias | stabilizing factor of microtubule orientation *(SAB/KIP) | 0.03 | Orthogroups_2024-Update | |
Seita.9G401900.1 | No alias | stabilizing factor of microtubule orientation *(SAB/KIP) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003917 | DNA topoisomerase type I activity | IEP | Predicted GO |
MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
MF | GO:0005244 | voltage-gated ion channel activity | IEP | Predicted GO |
MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Predicted GO |
MF | GO:0005253 | anion channel activity | IEP | Predicted GO |
MF | GO:0005254 | chloride channel activity | IEP | Predicted GO |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006821 | chloride transport | IEP | Predicted GO |
MF | GO:0008308 | voltage-gated anion channel activity | IEP | Predicted GO |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Predicted GO |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Predicted GO |
MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0016020 | membrane | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predicted GO |
MF | GO:0022832 | voltage-gated channel activity | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019443 | FMP27_C | 381 | 924 |
No external refs found! |