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  5. LOC_Os03g52650

LOC_Os03g52650


Description : syntaxin-related protein, putative, expressed


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g52650
Cluster HCCA clusters: cluster_0105

Target Alias Description ECC score Gene Family Method Actions
Bradi1g06372 No alias syntaxin of plants 121 0.03 Orthogroups_2024-Update
Brara.F00536.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.02 Orthogroups_2024-Update
Brara.F00751.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
GRMZM2G357636 No alias syntaxin of plants 131 0.02 Orthogroups_2024-Update
Mp7g13190.1 No alias SYP1-group Qa-type SNARE component 0.02 Orthogroups_2024-Update
PSME_00055228-RA No alias (at4g33990 : 129.0) embryo defective 2758 (EMB2758);... 0.02 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
Pp1s16_111V6 No alias Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 0.02 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.02 Orthogroups_2024-Update
Solyc07g052470 No alias Syntaxin, putative (AHRD V3.3 *** B9SUS4_RICCO) 0.03 Orthogroups_2024-Update
Solyc10g081850 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.02 Orthogroups_2024-Update
Sopen06g018880 No alias SNARE domain 0.03 Orthogroups_2024-Update
Sopen10g032370 No alias SNARE domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 249 301
IPR006011 Syntaxin_N 42 248
No external refs found!