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  5. LOC_Os03g58764

LOC_Os03g58764


Description : OsFBDUF18 - F-box and DUF domain containing protein, expressed


Gene families : OG_42_0000263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os03g58764
Cluster HCCA clusters: cluster_0133

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G011380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os04g47550 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g37060 No alias OsFBDUF52 - F-box and DUF domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.004G134900 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 Orthogroups_2024-Update
Potri.004G137700 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 Orthogroups_2024-Update
Seita.5G056600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G170200.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen04g035710 No alias Protein of unknown function (DUF295) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006743 ubiquinone metabolic process IEP Predicted GO
BP GO:0006744 ubiquinone biosynthetic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019211 phosphatase activator activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042181 ketone biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1901661 quinone metabolic process IEP Predicted GO
BP GO:1901663 quinone biosynthetic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR028144 CYSTM_dom 628 677
IPR005174 DUF295 437 495
IPR001810 F-box_dom 120 153
No external refs found!