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  5. LOC_Os04g22390

LOC_Os04g22390


Description : short chain dehydrogenase/reductase protein, putative, expressed


Gene families : OG_42_0000257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000257_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os04g22390
Cluster HCCA clusters: cluster_0095

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G000932 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G121034 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G013970.6 No alias Unknown function 0.02 Orthogroups_2024-Update
Pp1s198_42V6 No alias short-chain dehydrogenase reductase family protein 0.02 Orthogroups_2024-Update
Solyc03g025400 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen03g031600 No alias short chain dehydrogenase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 32 179
No external refs found!