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  5. LOC_Os04g27540

LOC_Os04g27540


Description : terpene synthase, putative, expressed


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Oryza release: LOC_Os04g27540
Cluster HCCA clusters: cluster_0001

Target Alias Description ECC score Gene Family Method Actions
A4A49_36773 No alias germacrene c synthase 0.02 Orthogroups_2024-Update
Bradi1g62538 No alias terpene synthase 21 0.01 Orthogroups_2024-Update
Glyma.12G138800 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
LOC_Os01g23530 No alias terpene synthase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.019G045400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Sobic.007G133900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 31 138
IPR005630 Terpene_synthase_metal-bd 180 442
No external refs found!