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  5. Solyc07g063120

Solyc07g063120


Description : Ubiquitin ligase protein cop1, putative (AHRD V3.3 *** B9T5N2_RICCO)


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g063120
Cluster HCCA clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
101888 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
141846 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
98534 No alias SPA1-related 4 0.03 Orthogroups_2024-Update
A4A49_27287 No alias protein spa1-related 3 0.02 Orthogroups_2024-Update
A4A49_29644 No alias e3 ubiquitin-protein ligase cop1 0.02 Orthogroups_2024-Update
A4A49_35805 No alias e3 ubiquitin-protein ligase cop1 0.08 Orthogroups_2024-Update
At1g53090 No alias SPA4 [Source:UniProtKB/TrEMBL;Acc:A0A178WBA0] 0.05 Orthogroups_2024-Update
Bradi2g48657 No alias SPA1-related 4 0.04 Orthogroups_2024-Update
Brara.C02328.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.07 Orthogroups_2024-Update
Brara.E00142.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
Brara.E02608.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
GRMZM2G061602 No alias SPA1-related 4 0.03 Orthogroups_2024-Update
Glyma.02G267800 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G214900 No alias SPA1-related 2 0.03 Orthogroups_2024-Update
Glyma.12G224600 No alias SPA1-related 3 0.05 Orthogroups_2024-Update
Glyma.13G276700 No alias SPA1-related 3 0.04 Orthogroups_2024-Update
Glyma.14G049700 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G090080.2 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.05 Orthogroups_2024-Update
HORVU3Hr1G068840.7 No alias component *(SPA) of substrate adaptor module of... 0.06 Orthogroups_2024-Update
HORVU6Hr1G079680.3 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
Kfl00502_0040 kfl00502_0040_v1.1 (at4g11110 : 483.0) Encodes a member of the SPA... 0.02 Orthogroups_2024-Update
LOC_Os05g49590 No alias suppressor of phythchrome A, putative, expressed 0.04 Orthogroups_2024-Update
Mp5g12010.1 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 Orthogroups_2024-Update
PSME_00014824-RA No alias (at2g32950 : 499.0) Represses photomorphogenesis and... 0.03 Orthogroups_2024-Update
Potri.001G399600 No alias SPA1-related 3 0.05 Orthogroups_2024-Update
Potri.014G095300 No alias SPA (suppressor of phyA-105) protein family 0.02 Orthogroups_2024-Update
Potri.014G159300 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Orthogroups_2024-Update
Pp1s154_52V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Pp1s180_148V6 No alias ubiquitin ligase protein 0.03 Orthogroups_2024-Update
Pp1s30_295V6 No alias ubiquitin ligase protein 0.06 Orthogroups_2024-Update
Pp1s81_234V6 No alias ubiquitin ligase protein 0.05 Orthogroups_2024-Update
Seita.3G139600.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.03 Orthogroups_2024-Update
Seita.5G302800.1 No alias component *(SPA) of substrate adaptor module of... 0.03 Orthogroups_2024-Update
Sobic.004G312600.1 No alias component *(COP1) of COP1-SPA light signal transduction... 0.05 Orthogroups_2024-Update
Sobic.009G238000.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.05 Orthogroups_2024-Update
Sopen07g031310 No alias WD domain, G-beta repeat 0.19 Orthogroups_2024-Update
evm.model.tig00000852.18 No alias (p93471|cop1_pea : 355.0) E3 ubiquitin ligase protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 207 329
IPR001680 WD40_repeat 757 792
IPR001680 WD40_repeat 656 690
No external refs found!