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  5. Solyc07g065000

Solyc07g065000


Description : PHD-finger protein (AHRD V3.3 *** G7K8Q7_MEDTR)


Gene families : OG_42_0004360 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004360_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g065000
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_09902 No alias phd finger protein 0.03 Orthogroups_2024-Update
LOC_Os02g48810 No alias PHD-finger family protein, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004860 protein kinase inhibitor activity IEP Predicted GO
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0007050 cell cycle arrest IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019210 kinase inhibitor activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 379 426
IPR001025 BAH_dom 714 827
No external refs found!