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  5. LOC_Os04g54420

LOC_Os04g54420


Description : protein of unknown function, DUF618 domain containing protein, expressed


Gene families : OG_42_0001250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g54420
Cluster HCCA clusters: cluster_0138

Target Alias Description ECC score Gene Family Method Actions
440209 No alias ENTH/VHS family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006903 RNA_pol_II-bd 60 119
No external refs found!