LOC_Os04g56280

Description : expressed protein

Gene families : OG_42_0000824 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000824_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g56280
Cluster	HCCA clusters: cluster_0001

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os09g21330	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os09g21550	No alias	expressed protein	0.02	Orthogroups_2024-Update
Seita.2G193800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.003G056400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.003G380700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005174	DUF295	283	319

External Links

No external refs found!