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  5. LOC_Os04g58180

LOC_Os04g58180


Description : WD-40 repeat family protein, putative, expressed


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58180
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
At5g42010 No alias Similarity to unknown protein... 0.02 Orthogroups_2024-Update
Glyma.08G147400 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G150300 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G178000 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os03g02440 No alias WD repeat-containing protein 44, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g49090 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G057600 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 445 481
IPR001680 WD40_repeat 328 361
IPR001680 WD40_repeat 486 523
IPR001680 WD40_repeat 620 657
No external refs found!