1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g58200

LOC_Os04g58200


Description : protochlorophyllide reductase A, chloroplast precursor, putative, expressed


Gene families : OG_42_0002679 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002679_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58200
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
A4A49_37298 No alias protochlorophyllide reductase, chloroplastic 0.05 Orthogroups_2024-Update
A4A49_39085 No alias protochlorophyllide reductase, chloroplastic 0.03 Orthogroups_2024-Update
Brara.J00901.1 No alias protochlorophyllide oxidoreductase *(POR) & EC_1.3... 0.02 Orthogroups_2024-Update
Cre01.g015350 No alias protochlorophyllide oxidoreductase A 0.01 Orthogroups_2024-Update
Glyma.12G222200 No alias protochlorophyllide oxidoreductase A 0.02 Orthogroups_2024-Update
HORVU1Hr1G044680.1 No alias protochlorophyllide oxidoreductase *(POR) & EC_1.3... 0.03 Orthogroups_2024-Update
HORVU2Hr1G119050.2 No alias protochlorophyllide oxidoreductase *(POR) & EC_1.3... 0.03 Orthogroups_2024-Update
MA_91782g0010 No alias (q41249|pora_cucsa : 546.0) Protochlorophyllide... 0.03 Orthogroups_2024-Update
PSME_00009289-RA No alias (q41249|pora_cucsa : 558.0) Protochlorophyllide... 0.03 Orthogroups_2024-Update
PSME_00018788-RA No alias (q41249|pora_cucsa : 572.0) Protochlorophyllide... 0.02 Orthogroups_2024-Update
Pp1s146_112V6 No alias protochlorophyllide reductase b 0.02 Orthogroups_2024-Update
Seita.3G014700.1 No alias protochlorophyllide oxidoreductase *(POR) & EC_1.3... 0.03 Orthogroups_2024-Update
Sobic.006G268200.1 No alias protochlorophyllide oxidoreductase *(POR) & EC_1.3... 0.03 Orthogroups_2024-Update
Solyc07g054210 No alias light dependent NADH:protochlorophyllide oxidoreductase 2 0.04 Orthogroups_2024-Update
Solyc10g006900 No alias light dependent NADH:protochlorophyllide oxidoreductase 3 s2 0.03 Orthogroups_2024-Update
Solyc12g013710 No alias light dependent NADH:protochlorophyllide oxidoreductase 1 0.03 Orthogroups_2024-Update
Sopen07g028140 No alias short chain dehydrogenase 0.05 Orthogroups_2024-Update
Sopen10g002810 No alias short chain dehydrogenase 0.05 Orthogroups_2024-Update
Sopen12g007060 No alias short chain dehydrogenase 0.03 Orthogroups_2024-Update
evm.model.tig00000076.85 No alias (at1g03630 : 342.0) Encodes for a protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR002347 SDR_fam 75 218
No external refs found!