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  5. LOC_Os04g58860

LOC_Os04g58860


Description : harpin-induced protein 1 domain containing protein, expressed


Gene families : OG_42_0000387 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58860
Cluster HCCA clusters: cluster_0108

Target Alias Description ECC score Gene Family Method Actions
A4A49_13929 No alias ndr1hin1-like protein 12 0.02 Orthogroups_2024-Update
Bradi4g41990 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Brara.A03395.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B00955.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_100525g0010 No alias (at3g44220 : 117.0) Late embryogenesis abundant (LEA)... 0.02 Orthogroups_2024-Update
MA_10436644g0010 No alias (at5g53730 : 129.0) Late embryogenesis abundant (LEA)... 0.03 Orthogroups_2024-Update
Potri.002G180000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update
Potri.012G006000 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000930 gamma-tubulin complex IEP Predicted GO
CC GO:0000931 gamma-tubulin large complex IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0004659 prenyltransferase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
CC GO:0008274 gamma-tubulin ring complex IEP Predicted GO
MF GO:0008318 protein prenyltransferase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0018342 protein prenylation IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0033566 gamma-tubulin complex localization IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034629 cellular protein-containing complex localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044450 microtubule organizing center part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0097354 prenylation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 80 184
No external refs found!