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  5. Solyc07g065980

Solyc07g065980


Description : alkaline alpha-galactosidase seed imbibition protein


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g065980
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
A4A49_20430 No alias putative galactinol--sucrose galactosyltransferase 2 0.03 Orthogroups_2024-Update
Bradi1g48050 No alias Raffinose synthase family protein 0.02 Orthogroups_2024-Update
Brara.B00875.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
PSME_00005363-RA No alias (at1g55740 : 295.0) seed imbibition 1 (SIP1); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00025208-RA No alias (at1g55740 : 1032.0) seed imbibition 1 (SIP1); CONTAINS... 0.04 Orthogroups_2024-Update
Potri.006G065700 No alias Raffinose synthase family protein 0.03 Orthogroups_2024-Update
Potri.011G166700 No alias seed imbibition 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0019915 lipid storage IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 16 739
No external refs found!