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  5. LOC_Os05g01240

LOC_Os05g01240


Description : AML1, putative, expressed


Gene families : OG_42_0001046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g01240
Cluster HCCA clusters: cluster_0074

Target Alias Description ECC score Gene Family Method Actions
At2g42890 No alias ML2 [Source:UniProtKB/TrEMBL;Acc:A0A178VQK0] 0.02 Orthogroups_2024-Update
At5g07290 No alias Protein MEI2-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYN7] 0.03 Orthogroups_2024-Update
Brara.I02886.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G000370.12 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.003G162700 No alias MEI2-like protein 1 0.02 Orthogroups_2024-Update
Potri.015G106000 No alias MEI2-like protein 1 0.02 Orthogroups_2024-Update
Solyc10g007770 No alias RNA-binding protein, putative (AHRD V3.3 *** B9T754_RICCO) 0.03 Orthogroups_2024-Update
Sopen10g003680 No alias RNA recognition motif 2 0.03 Orthogroups_2024-Update
evm.model.tig00000053.15 No alias (at5g61960 : 235.0) A member of mei2-like gene family,... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 779 875
IPR000504 RRM_dom 272 333
IPR000504 RRM_dom 357 415
No external refs found!