1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g33280

LOC_Os05g33280


Description : thylakoid lumen protein, putative, expressed


Gene families : OG_42_0006589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006589_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g33280
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
127459 No alias thylakoid lumen 18.3 kDa protein 0.02 Orthogroups_2024-Update
Cre03.g182150 No alias thylakoid lumen 18.3 kDa protein 0.02 Orthogroups_2024-Update
Kfl00736_0090 kfl00736_0090_v1.1 (at1g54780 : 253.0) Encodes a thylakoid lumen protein... 0.06 Orthogroups_2024-Update
MA_10433010g0010 No alias (at1g54780 : 325.0) Encodes a thylakoid lumen protein... 0.02 Orthogroups_2024-Update
Seita.3G249600.1 No alias protein involved in PS-II assembly *(Psb32) 0.05 Orthogroups_2024-Update
Sobic.009G130700.1 No alias protein involved in PS-II assembly *(Psb32) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007621 TPM_dom 176 300
No external refs found!