LOC_Os05g34160

Description : mTERF domain containing protein, expressed

Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g34160
Cluster	HCCA clusters: cluster_0059

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g00852	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Bradi4g23197	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Bradi4g23227	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
Brara.C04011.1	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.08G305300	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.18G112300	No alias	Mitochondrial transcription termination factor family protein	0.04	Orthogroups_2024-Update
Glyma.18G112400	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Glyma.18G112700	No alias	Mitochondrial transcription termination factor family protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G061360.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G003550.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
HORVU6Hr1G003570.23	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G081400.3	No alias	mTERF-type transcription factor	0.03	Orthogroups_2024-Update
MA_178046g0010	No alias	(at5g64950 : 104.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
MA_26585g0010	No alias	(at5g64950 : 83.2) Mitochondrial transcription...	0.04	Orthogroups_2024-Update
MA_92135g0010	No alias	(at5g64950 : 117.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00000442-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00009256-RA	No alias	(at1g62110 : 82.4) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
PSME_00023020-RA	No alias	(at1g79220 : 108.0) Mitochondrial transcription...	0.03	Orthogroups_2024-Update
PSME_00056620-RA	No alias	(at1g79220 : 139.0) Mitochondrial transcription...	0.02	Orthogroups_2024-Update
Potri.003G190700	No alias	Mitochondrial transcription termination factor family protein	0.03	Orthogroups_2024-Update
Potri.012G046700	No alias	Mitochondrial transcription termination factor family protein	0.06	Orthogroups_2024-Update
Seita.1G321200.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.2G184700.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.4G092000.1	No alias	mTERF-type transcription factor	0.04	Orthogroups_2024-Update
Seita.4G094400.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G130600.1	No alias	mTERF-type transcription factor	0.05	Orthogroups_2024-Update
Sobic.002G179800.1	No alias	mTERF-type transcription factor	0.02	Orthogroups_2024-Update
Sopen04g028730	No alias	mTERF	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000178	exosome (RNase complex)	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predicted GO
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
BP	GO:0006006	glucose metabolic process	IEP	Predicted GO
BP	GO:0006094	gluconeogenesis	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
BP	GO:0018130	heterocycle biosynthetic process	IEP	Predicted GO
BP	GO:0019318	hexose metabolic process	IEP	Predicted GO
BP	GO:0019319	hexose biosynthetic process	IEP	Predicted GO
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO
BP	GO:0090407	organophosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
CC	GO:1905354	exoribonuclease complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003690	MTERF	76	309
IPR003690	MTERF	244	317

External Links

No external refs found!

LOC_Os05g34160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation