Description : pentatricopeptide, putative, expressed
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os05g36350 | |
Cluster | HCCA clusters: cluster_0054 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
94907 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
99677 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
At3g29230 | No alias | Pentatricopeptide repeat-containing protein At3g29230... | 0.02 | Orthogroups_2024-Update | |
At4g37380 | No alias | Pentatricopeptide repeat-containing protein ELI1,... | 0.04 | Orthogroups_2024-Update | |
Bradi5g01440 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.D02053.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Brara.E01323.1 | No alias | RNA editing factor *(OTP81) | 0.02 | Orthogroups_2024-Update | |
Brara.G01254.1 | No alias | RNA editing factor *(CREF7) | 0.02 | Orthogroups_2024-Update | |
Brara.J02567.1 | No alias | RNA editing factor *(MEF37) | 0.02 | Orthogroups_2024-Update | |
GRMZM2G110483 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
GRMZM2G399433 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.06G161900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G127400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.08G294900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.17G209700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
HORVU0Hr1G009930.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G083680.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G087370.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G012210.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G061600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G080810.1 | No alias | RNA editing factor *(MEF10) | 0.04 | Orthogroups_2024-Update | |
LOC_Os02g44480 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
MA_16457g0010 | No alias | (at2g22070 : 558.0) pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
MA_81436g0010 | No alias | (at4g21300 : 593.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00052756-RA | No alias | (at3g09040 : 614.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00057248-RA | No alias | (at1g11290 : 733.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
Pp1s543_6V6 | No alias | hypothetical protein [Oryza sativa (japonica cultivar-group)] | 0.01 | Orthogroups_2024-Update | |
Sobic.002G384800.1 | No alias | Unknown function | 0.01 | Orthogroups_2024-Update | |
Sobic.002G403500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.008G147400.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc02g069500 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Sopen01g002910 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen01g032600 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen01g041280 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen01g054250 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen02g024180 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen02g025050 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen02g039140 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen03g002990 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen04g022860 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen09g027460 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen09g031050 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen10g004380 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2025.47 | No alias | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005215 | transporter activity | IEP | Predicted GO |
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
BP | GO:0006270 | DNA replication initiation | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0015858 | nucleoside transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
MF | GO:0019208 | phosphatase regulator activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
BP | GO:0022406 | membrane docking | IEP | Predicted GO |
MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0022857 | transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
MF | GO:0035299 | inositol pentakisphosphate 2-kinase activity | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
BP | GO:0051640 | organelle localization | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
BP | GO:0140029 | exocytic process | IEP | Predicted GO |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predicted GO |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | Predicted GO |
CC | GO:1903293 | phosphatase complex | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No external refs found! |