LOC_Os05g39320

Description : thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed

Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g39320
Cluster	HCCA clusters: cluster_0117

Target	Alias	Description	ECC score	Gene Family Method
AC197705.4_FG001	No alias	Thiamine pyrophosphate dependent pyruvate decarboxylase...	0.02	Orthogroups_2024-Update
Bradi1g16660	No alias	Thiamine pyrophosphate dependent pyruvate decarboxylase...	0.03	Orthogroups_2024-Update
Glyma.15G056400	No alias	pyruvate decarboxylase-2	0.03	Orthogroups_2024-Update
MA_12415g0010	No alias	(p51851\|pdc2_pea : 593.0) Pyruvate decarboxylase isozyme...	0.02	Orthogroups_2024-Update
Mp3g21090.1	No alias	pyruvate decarboxylase	0.02	Orthogroups_2024-Update
PSME_00022292-RA	No alias	(at4g33070 : 389.0) Thiamine pyrophosphate dependent...	0.03	Orthogroups_2024-Update
Sobic.009G169000.1	No alias	pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030976	thiamine pyrophosphate binding	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
BP	GO:0001101	response to acid chemical	IEP	Predicted GO
BP	GO:0006790	sulfur compound metabolic process	IEP	Predicted GO
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
BP	GO:0009415	response to water	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0010035	response to inorganic substance	IEP	Predicted GO
BP	GO:0016043	cellular component organization	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
MF	GO:0030599	pectinesterase activity	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0042545	cell wall modification	IEP	Predicted GO
BP	GO:0045229	external encapsulating structure organization	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
BP	GO:0071555	cell wall organization	IEP	Predicted GO
BP	GO:1901700	response to oxygen-containing compound	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR012001	Thiamin_PyroP_enz_TPP-bd_dom	44	208
IPR012000	Thiamin_PyroP_enz_cen_dom	241	356
IPR011766	TPP_enzyme-bd_C	451	575

External Links

No external refs found!