LOC_Os05g39590

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g39590
Cluster	HCCA clusters: cluster_0086

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.04	Orthogroups_2024-Update
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.02	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_34891	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
At1g12610	No alias	Dehydration-responsive element-binding protein 1F...	0.02	Orthogroups_2024-Update
At2g25820	No alias	Ethylene-responsive transcription factor ERF042...	0.03	Orthogroups_2024-Update
At2g46310	No alias	Ethylene-responsive transcription factor CRF5...	0.02	Orthogroups_2024-Update
At3g16770	No alias	Ethylene-responsive transcription factor RAP2-3...	0.03	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.02	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.03	Orthogroups_2024-Update
Bradi1g00666	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Bradi1g57970	No alias	C-repeat/DRE binding factor 2	0.02	Orthogroups_2024-Update
Bradi2g31480	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Bradi2g57201	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.E00471.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.G00520.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.G03053.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.J00058.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
GRMZM2G173579	No alias	Rho GTPase activating protein with PAK-box/P21-Rho-binding domain	0.02	Orthogroups_2024-Update
GRMZM2G380377	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.07G017300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G216600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G164800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU0Hr1G016540.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU1Hr1G070410.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU2Hr1G094780.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G015350.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
MA_9304g0020	No alias	(at1g28360 : 87.4) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00008357-RA	No alias	(at5g21960 : 123.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.01	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.02	Orthogroups_2024-Update
Potri.007G090600	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.02	Orthogroups_2024-Update
Potri.010G046600	No alias	DORNROSCHEN-like	0.02	Orthogroups_2024-Update
Potri.010G072300	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Potri.012G134000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.016G126100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.01	Orthogroups_2024-Update
Pp1s19_272V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s296_32V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Seita.4G039700.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.4G092200.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.8G012200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G260800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G133566.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc02g077840	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.02	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc05g052040	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen03g041270	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
MF	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0015020	glucuronosyltransferase activity	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
BP	GO:0045017	glycerolipid biosynthetic process	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	67	114

External Links

No external refs found!

LOC_Os05g39590

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation