LOC_Os05g43960

Description : no apical meristem protein, putative, expressed

Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os05g43960
Cluster	HCCA clusters: cluster_0001

Target	Alias	Description	ECC score	Gene Family Method
A4A49_08976	No alias	nac domain-containing protein 2	0.01	Orthogroups_2024-Update
A4A49_31784	No alias	nac domain-containing protein 35	0.02	Orthogroups_2024-Update
At1g01720	No alias	ATAF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8W1]	0.02	Orthogroups_2024-Update
Brara.B03110.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.06G157400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Orthogroups_2024-Update
Glyma.16G043200	No alias	NAC domain containing protein 47	0.02	Orthogroups_2024-Update
Glyma.19G108800	No alias	NAC domain containing protein 47	0.02	Orthogroups_2024-Update
HORVU1Hr1G064300.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
PSME_00025861-RA	No alias	(at1g01720 : 238.0) Belongs to a large family of...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
BP	GO:0005996	monosaccharide metabolic process	IEP	Predicted GO
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predicted GO
BP	GO:0019321	pentose metabolic process	IEP	Predicted GO
BP	GO:0019566	arabinose metabolic process	IEP	Predicted GO
BP	GO:0046373	L-arabinose metabolic process	IEP	Predicted GO
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	20	156

External Links

No external refs found!

LOC_Os05g43960

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation