Solyc08g008660

Description : NAC domain-containing protein, putative (AHRD V3.3 *** A0A061G3T7_THECC)

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc08g008660
Cluster	HCCA clusters: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
A4A49_25058	No alias	nac domain-containing protein 86	0.03	Orthogroups_2024-Update
A4A49_37077	No alias	nac domain-containing protein 100	0.03	Orthogroups_2024-Update
A4A49_37618	No alias	nac domain-containing protein 86	0.05	Orthogroups_2024-Update
At1g32770	No alias	NAC domain-containing protein 12...	0.02	Orthogroups_2024-Update
At2g27300	No alias	NAC domain-containing protein 40...	0.05	Orthogroups_2024-Update
At2g46770	No alias	NAC domain-containing protein 43...	0.05	Orthogroups_2024-Update
At3g18400	No alias	NAC domain containing protein 58...	0.03	Orthogroups_2024-Update
At4g17980	No alias	NAC domain containing protein 71 [Source:TAIR;Acc:AT4G17980]	0.05	Orthogroups_2024-Update
At5g46590	No alias	NAC domain-containing protein 96...	0.03	Orthogroups_2024-Update
Bradi1g17440	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Bradi1g50057	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Bradi3g13727	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Bradi3g33957	No alias	NAC domain containing protein 71	0.05	Orthogroups_2024-Update
Brara.A00921.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.A03888.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B00141.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.B02268.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.D01471.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03613.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.J00883.1	No alias	NAC-type transcription factor	0.06	Orthogroups_2024-Update
GRMZM2G069047	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
GRMZM2G082709	No alias	NAC domain containing protein 71	0.04	Orthogroups_2024-Update
GRMZM2G406204	No alias	NAC domain containing protein 28	0.05	Orthogroups_2024-Update
GRMZM5G898290	No alias	NAC domain containing protein 80	0.02	Orthogroups_2024-Update
Glyma.04G167200	No alias	NAC domain containing protein 100	0.05	Orthogroups_2024-Update
Glyma.16G152100	No alias	Arabidopsis NAC domain containing protein 87	0.03	Orthogroups_2024-Update
Glyma.18G043900	No alias	NAC domain containing protein 28	0.04	Orthogroups_2024-Update
LOC_Os02g42970	No alias	NAC domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g48550	No alias	no apical meristem protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_6571438g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00006177-RA	No alias	(at5g53950 : 292.0) Transcriptional activator of the NAC...	0.03	Orthogroups_2024-Update
PSME_00009079-RA	No alias	(at1g65910 : 290.0) NAC domain containing protein 28...	0.04	Orthogroups_2024-Update
PSME_00014399-RA	No alias	(at5g53950 : 274.0) Transcriptional activator of the NAC...	0.04	Orthogroups_2024-Update
PSME_00030678-RA	No alias	(at1g65910 : 262.0) NAC domain containing protein 28...	0.03	Orthogroups_2024-Update
PSME_00050582-RA	No alias	(at5g53950 : 267.0) Transcriptional activator of the NAC...	0.05	Orthogroups_2024-Update
Potri.001G144400	No alias	NAC domain containing protein 96	0.02	Orthogroups_2024-Update
Potri.001G396300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.001G448400	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.002G005800	No alias	NAC (No Apical Meristem) domain transcriptional...	0.04	Orthogroups_2024-Update
Potri.003G089800	No alias	NAC domain containing protein 96	0.02	Orthogroups_2024-Update
Potri.005G058900	No alias	NAC domain containing protein 82	0.03	Orthogroups_2024-Update
Potri.008G031800	No alias	NAC domain containing protein 2	0.03	Orthogroups_2024-Update
Potri.011G153300	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.012G001400	No alias	NAC domain containing protein 100	0.02	Orthogroups_2024-Update
Potri.014G104800	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
Potri.017G139500	No alias	NAC domain containing protein 28	0.03	Orthogroups_2024-Update
Pp1s223_12V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Pp1s279_85V6	No alias	no apical meristem	0.02	Orthogroups_2024-Update
Sobic.001G163800.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.010G155100.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Solyc06g065410	No alias	NAC domain-containing protein, putative (AHRD V3.3 ***...	0.05	Orthogroups_2024-Update
Solyc06g069710	No alias	NAC domain protein, (AHRD V3.3 *** A0A061FWI7_THECC)	0.03	Orthogroups_2024-Update
Solyc06g074170	No alias	NAC domain protein, (AHRD V3.3 *** A0A061GVZ7_THECC)	0.03	Orthogroups_2024-Update
Solyc07g062840	No alias	goblet	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
BP	GO:0006397	mRNA processing	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	12	139

External Links

No external refs found!

Solyc08g008660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation