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  5. LOC_Os06g12210

LOC_Os06g12210


Description : helix-loop-helix DNA-binding domain containing protein, expressed


Gene families : OG_42_0001251 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g12210
Cluster HCCA clusters: cluster_0001

Target Alias Description ECC score Gene Family Method Actions
Bradi1g73161 No alias BANQUO 3 0.02 Orthogroups_2024-Update
Brara.H02165.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen05g003170 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 15 55
No external refs found!