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  5. LOC_Os06g19260

LOC_Os06g19260


Description : cadmium tolerance factor, putative, expressed


Gene families : OG_42_0000570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000570_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g19260
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
Bradi3g55596 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
GRMZM2G013406 No alias Ankyrin repeat family protein 0.03 Orthogroups_2024-Update
GRMZM2G043857 No alias Ankyrin repeat family protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G032190.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G043810.8 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.014G050700 No alias Ankyrin repeat family protein 0.02 Orthogroups_2024-Update
Seita.3G310300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G126000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G149200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G122400.4 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR026961 PGG_dom 16 127
IPR026961 PGG_dom 356 461
IPR026961 PGG_dom 689 800
IPR026961 PGG_dom 529 637
IPR026961 PGG_dom 168 289
No external refs found!