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Description : zinc finger, C3HC4 type domain containing protein, expressed
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Oryza release: LOC_Os06g34650 | |
| Cluster | HCCA clusters: cluster_0128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_10444 | No alias | e3 ubiquitin-protein ligase atl9 | 0.02 | Orthogroups_2024-Update | |
| A4A49_21361 | No alias | ring-h2 finger protein atl78 | 0.03 | Orthogroups_2024-Update | |
| A4A49_39617 | No alias | ring-h2 finger protein atl1 | 0.03 | Orthogroups_2024-Update | |
| A4A49_59878 | No alias | ring-h2 finger protein atl60 | 0.02 | Orthogroups_2024-Update | |
| At1g49200 | No alias | RING-H2 finger protein ATL75... | 0.02 | Orthogroups_2024-Update | |
| At1g49210 | No alias | E3 ubiquitin-protein ligase ATL76... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g46750 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.E00872.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G067900 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.12G121400 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G096480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G067020.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G077610.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| HORVU7Hr1G108590.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g60730 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g02350 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| MA_101154g0010 | No alias | (at3g16720 : 130.0) RING-H2 protein induced after... | 0.02 | Orthogroups_2024-Update | |
| Pp1s20_280V6 | No alias | ring finger | 0.02 | Orthogroups_2024-Update | |
| Pp1s213_71V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
| Pp1s41_270V6 | No alias | zinc finger (c3hc4-type ring finger) family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s460_19V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
| Seita.1G327300.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.2G037300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G087800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.9G336200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G175200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G205400.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Solyc01g081040 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.02 | Orthogroups_2024-Update | |
| Solyc04g082690 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G20823.1) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
| CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
| CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044432 | endoplasmic reticulum part | IEP | Predicted GO |
| CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 85 | 128 |
| No external refs found! |