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  5. LOC_Os06g36090

LOC_Os06g36090


Description : ABC-2 type transporter, putative, expressed


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g36090
Cluster HCCA clusters: cluster_0018

Target Alias Description ECC score Gene Family Method Actions
267739 No alias pleiotropic drug resistance 6 0.03 Orthogroups_2024-Update
415867 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
At4g15230 No alias ABC transporter G family member 30... 0.03 Orthogroups_2024-Update
Bradi1g38025 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.04G069800 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.20G187400 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Kfl00056_0220 kfl00056_0220_v1.1 (q7pc80|pdr1_orysa : 1395.0) Probable pleiotropic drug... 0.01 Orthogroups_2024-Update
Kfl00175_0190 kfl00175_0190_v1.1 (at2g29940 : 809.0) pleiotropic drug resistance 3... 0.02 Orthogroups_2024-Update
PSME_00000647-RA No alias (at1g59870 : 1668.0) ATP binding cassette transporter.... 0.01 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.04 Orthogroups_2024-Update
PSME_00014724-RA No alias (q76cu2|pdr1_tobac : 1860.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Pp1s170_10V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Seita.6G234600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 418 485
IPR013525 ABC_2_trans 892 1105
IPR013525 ABC_2_trans 201 413
IPR003439 ABC_transporter-like 589 746
No external refs found!