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  5. LOC_Os06g36220

LOC_Os06g36220


Description : OsFBX198 - F-box domain containing protein, expressed


Gene families : OG_42_0000187 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g36220
Cluster HCCA clusters: cluster_0054

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18326 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g19477 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G037320.9 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g09750 No alias OsFBL44 - F-box domain and LRR containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03620 No alias OsFBX344 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g03780 No alias OsFBX351 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os11g09670 No alias OsFBX409 - F-box domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.1G188800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G076800.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 22 60
No external refs found!