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  5. LOC_Os06g37010

LOC_Os06g37010


Description : metal cation transporter, putative, expressed


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g37010
Cluster HCCA clusters: cluster_0004

Target Alias Description ECC score Gene Family Method Actions
230231 No alias zinc transporter 4 precursor 0.02 Orthogroups_2024-Update
231997 No alias zinc transporter 4 precursor 0.03 Orthogroups_2024-Update
92505 No alias iron regulated transporter 3 0.02 Orthogroups_2024-Update
Brara.A01066.1 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.04 Orthogroups_2024-Update
Brara.I05200.1 No alias metal cation transporter *(ZIP) 0.02 Orthogroups_2024-Update
Cre06.g299600 No alias zinc transporter 12 precursor 0.01 Orthogroups_2024-Update
HORVU4Hr1G003050.4 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.03 Orthogroups_2024-Update
Kfl00274_0050 kfl00274_0050_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_199003g0010 No alias (at2g30080 : 145.0) member of Fe(II) transporter isolog... 0.02 Orthogroups_2024-Update
PSME_00015190-RA No alias (at1g10970 : 360.0) A member of Zrt- and Irt-related... 0.05 Orthogroups_2024-Update
PSME_00021692-RA No alias (at1g10970 : 287.0) A member of Zrt- and Irt-related... 0.03 Orthogroups_2024-Update
PSME_00027795-RA No alias (at3g12750 : 349.0) A member of Zrt- and Irt-related... 0.03 Orthogroups_2024-Update
Potri.001G279300 No alias ZIP metal ion transporter family 0.03 Orthogroups_2024-Update
Seita.2G090600.1 No alias metal cation transporter *(ZIP) 0.03 Orthogroups_2024-Update
Seita.9G146100.1 No alias metal cation transporter *(ZIP) &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046873 metal ion transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 47 401
No external refs found!