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  5. LOC_Os06g46030

LOC_Os06g46030


Description : DUF640 domain containing protein, putative, expressed


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g46030
Cluster HCCA clusters: cluster_0079

Target Alias Description ECC score Gene Family Method Actions
A4A49_00415 No alias protein light-dependent short hypocotyls 4 0.03 Orthogroups_2024-Update
Brara.D01881.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G03612.1 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
MA_12926g0010 No alias (at3g23290 : 222.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4);... 0.03 Orthogroups_2024-Update
PSME_00038756-RA No alias (at1g07090 : 219.0) LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6);... 0.03 Orthogroups_2024-Update
Pp1s10_72V6 No alias T16B12.3; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 18 135
No external refs found!