LOC_Os06g50060


Description : ras-related protein, putative, expressed


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g50060
Cluster HCCA clusters: cluster_0006

Target Alias Description ECC score Gene Family Method Actions
At4g18430 No alias Ras-related protein RABA1e... 0.03 Orthogroups_2024-Update
At5g59150 No alias Ras-related protein RABA2d... 0.04 Orthogroups_2024-Update
Brara.H00953.1 No alias A-class RAB GTPase 0.04 Orthogroups_2024-Update
GRMZM2G052509 No alias RAB GTPase homolog A3 0.02 Orthogroups_2024-Update
Glyma.02G176000 No alias RAB GTPase homolog A4D 0.04 Orthogroups_2024-Update
MA_129080g0010 No alias (q39434|rb2bv_betvu : 338.0) Ras-related protein Rab2BV... 0.02 Orthogroups_2024-Update
Potri.002G175700 No alias RAB GTPase homolog A3 0.02 Orthogroups_2024-Update
Potri.011G070300 No alias RAB GTPase homolog A1C 0.02 Orthogroups_2024-Update
Sobic.009G003800.1 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 9 169
No external refs found!