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  5. LOC_Os06g51110

LOC_Os06g51110


Description : cyclin, putative, expressed


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os06g51110
Cluster HCCA clusters: cluster_0105

Target Alias Description ECC score Gene Family Method Actions
97411 No alias Cyclin A1;1 0.02 Orthogroups_2024-Update
A4A49_04406 No alias putative cyclin-b3-1 0.02 Orthogroups_2024-Update
Brara.K01558.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.04G043350 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.02 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.03 Orthogroups_2024-Update
LOC_Os01g13260 No alias cyclin-A1, putative, expressed 0.03 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.03 Orthogroups_2024-Update
PSME_00015735-RA No alias (p34800|ccn1_antma : 353.0) G2/mitotic-specific cyclin-1... 0.02 Orthogroups_2024-Update
Potri.005G181400 No alias Cyclin A1;1 0.02 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004832 valine-tRNA ligase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006438 valyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 293 408
IPR006671 Cyclin_N 165 291
No external refs found!