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  5. LOC_Os07g01770

LOC_Os07g01770


Description : expressed protein


Gene families : OG_42_0000207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g01770
Cluster HCCA clusters: cluster_0115

Target Alias Description ECC score Gene Family Method Actions
At3g17980 No alias Protein C2-DOMAIN ABA-RELATED 4... 0.02 Orthogroups_2024-Update
Glyma.20G018100 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 Orthogroups_2024-Update
LOC_Os02g22130 No alias expressed protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
BP GO:0006354 DNA-templated transcription, elongation IEP Predicted GO
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
CC GO:0016593 Cdc73/Paf1 complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 420 478
IPR000008 C2_dom 8 95
IPR001223 Glyco_hydro18_cat 221 357
No external refs found!