Description : retrotransposon protein, putative, unclassified, expressed
Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Oryza release: LOC_Os07g02230 | |
Cluster | HCCA clusters: cluster_0137 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU2Hr1G104780.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G085360.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os10g12174 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os11g44830 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEA | InterProScan predictions |
MF | GO:0003678 | DNA helicase activity | IEA | InterProScan predictions |
BP | GO:0006281 | DNA repair | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000213 | tRNA-intron endonuclease activity | IEP | Predicted GO |
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Predicted GO |
MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | Predicted GO |
MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters | IEP | Predicted GO |
MF | GO:0016894 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters | IEP | Predicted GO |
BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
CC | GO:0017119 | Golgi transport complex | IEP | Predicted GO |
MF | GO:0019213 | deacetylase activity | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
BP | GO:0048193 | Golgi vesicle transport | IEP | Predicted GO |
BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
No external refs found! |