1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os07g32170

LOC_Os07g32170


Description : OsSPL13 - SBP-box gene family member, expressed


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os07g32170
Cluster HCCA clusters: cluster_0086

Target Alias Description ECC score Gene Family Method Actions
Brara.G01764.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I03020.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Cre07.g345050 No alias squamosa promoter binding protein-like 10 0.01 Orthogroups_2024-Update
HORVU0Hr1G020810.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_3179g0020 No alias (at1g02065 : 176.0) Encodes an SBP-box gene, a member of... 0.02 Orthogroups_2024-Update
Potri.008G097900 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Potri.015G060400 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Pp1s194_61V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Pp1s337_52V6 No alias squamosa promoter-binding 0.02 Orthogroups_2024-Update
Seita.3G022100.1 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc05g012040 No alias Squamosa promoter binding protein 6b 0.02 Orthogroups_2024-Update
Solyc10g018780 No alias Squamosa promoter binding protein 8a 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004333 SBP_dom 110 183
No external refs found!